RS II Archives - Page 152 of 169

July 7, 2019

Complete genome sequence of Escherichia coli 81009, a representative of the sequence type 131 C1-M27 clade with a multidrug-resistant phenotype.

The sequence type 131 (ST131)-H30 clone is responsible for a significant proportion of multidrug-resistant extraintestinal Escherichia coli infections. Recently, the C1-M27 clade of ST131-H30, associated with blaCTX-M-27, has emerged. The complete genome sequence of E. coli isolate 81009 belonging to this clone, previously used during the development of ST131-specific monoclonal antibodies, is reported here. Copyright © 2018 Mutti et al.

July 7, 2019

Draft genome sequence of Micromonospora sp. strain WMMA1996, a marine sponge-associated bacterium.

Micromonospora sp. strain WMMA1996 was isolated in 2013 off the coast of the Florida Keys, United States, from a marine sponge as part of bacterial coculture-based drug discovery initiatives. Analysis of the ~6.44-Mb genome reveals this microbe’s potential role in the discovery of new drugs. Copyright © 2018 Braun et al.

July 7, 2019

Complete genome sequence of a type strain of Mycobacterium abscessus subsp. bolletii, a member of the Mycobacterium abscessus complex.

Mycobacterium abscessus subsp. bolletii is a rapidly growing mycobacterial organism for which the taxonomy is unclear. Here, we report the complete genome sequence of a Mycobacterium abscessus subsp. bolletii type strain. This sequence will provide essential information for future taxonomic and comparative genome studies of these mycobacteria.

July 7, 2019

High-quality complete genome sequences of three bovine Shiga toxin-producing Escherichia coli O177:H- (fliCH25) isolates harboring virulent stx2 and multiple plasmids.

Shiga toxin-producingEscherichia coli(STEC) bacteria are zoonotic pathogens. We report here the high-quality complete genome sequences of three STEC O177:H- (fliCH25) strains, SMN152SH1, SMN013SH2, and SMN197SH3. The assembled genomes consisted of one optical map-verified circular chromosome for each strain, plus two plasmids for SMN013SH2 and three plasmids for SMN152SH1 and SMN197SH3, respectively. Copyright © 2018 Sheng et al.

July 7, 2019

Complete genome sequence of the model oleaginous alga Nannochloropsis gaditana CCMP1894.

The model oleaginous alga Nannochloropsis gaditana was completely sequenced using a combination of optical mapping and next-generation sequencing technologies to generate one of the most complete eukaryotic genomes published to date. The assembled genome is 30.7?Mb long.

July 7, 2019

Genome sequences of 12 Pseudomonas lundensis strains isolated from the lungs of humans.

We report here the first complete genome sequence of a human Pseudomonas lundensis isolate, strain AU1044, and the draft genomes of 11 other clinical P. lundensis strains, isolated from the lungs of cystic fibrosis patients. The genome of strain AU1044 is 4.81 Mb and encodes seven 16S rRNAs.

July 7, 2019

Draft genome sequence of an active heterotrophic nitrifier-denitrifier, Cupriavidus pauculus UM1.

Here, we present the draft genome sequence ofCupriavidus pauculusUM1, a metal-resistant heterotrophic nitrifier-denitrifier capable of synthesizing nitrite from pyruvic oxime. The size of the genome is 7,402,815 bp with a GC content of 64.8%. This draft assembly consists of 38 scaffolds. Copyright © 2018 Putonti et al.

July 7, 2019

Draft genome sequence of Cyanobacterium sp. strain HL-69, isolated from a benthic microbial mat from a magnesium sulfate-dominated hypersaline lake.

The complete genome sequence ofCyanobacteriumsp. strain HL-69 consists of 3,155,247 bp and contains 2,897 predicted genes comprising a chromosome and two plasmids. The genome is consistent with a halophilic nondiazotrophic phototrophic lifestyle, and this organism is able to synthesize most B vitamins and produces several secondary metabolites. Copyright © 2018 Mobberley et al.

July 7, 2019

Complete genome sequence of Methanobrevibacter smithii strain KB11, isolated from a Korean fecal sample.

The archaeon Methanobrevibacter smithii is a major colonizer of the human gut. Methanobrevibacter smithii strain KB11 was newly isolated from a Korean fecal sample. Here, we present the complete genome sequence of strain KB11 and a brief comparison with that of M. smithii type strain ATCC 35061T.

July 7, 2019

Draft genome sequence of Bacillus sp. strain UFRGS-B20, a hydrocarbon degrader.

Bacillus sp. strain UFRGS-B20 was isolated in 2012 from Brazilian land-farming soil contaminated with petrochemical oily sludge. This strain was subjected to hydrocarbon biodegradation tests, showing degradation rates of up to 60%. Here, we present the 6.82-Mb draft genome sequence of the strain, which contains 2,178 proteins with functional assignments.

July 7, 2019

Complete genome sequences of Enterobacter cancerogenus CR-Eb1 and Enterococcus sp. strain CR-Ec1, isolated from the larval gut of the greater wax moth, Galleria mellonella.

Enterobacter cancerogenus CR-Eb1 and Enterococcus sp. CR-Ec1 were isolated from the larval gut of Galleria mellonella, the greater wax moth. Here, we report the completed and annotated genome sequences of insect gut-dwelling bacteria.

July 7, 2019

Complete genome sequence of Pseudomonas sp. strain NC02, isolated from soil.

We report here the complete genome sequence of Pseudomonas sp. strain NC02, isolated from soil in eastern Massachusetts. We assembled PacBio reads into a single closed contig with 132× mean coverage and then polished this contig using Illumina MiSeq reads, yielding a 6,890,566-bp sequence with 61.1% GC content. Copyright © 2018 Cerra et al.

July 7, 2019

Complete genome sequence of Escherichia coli ML35.

We report here the complete genome sequence of Escherichia coli strain ML35. We assembled PacBio reads into a single closed contig with 169× mean coverage and then polished this contig using Illumina MiSeq reads, yielding a 4,918,774-bp sequence with 50.8% GC content. Copyright © 2018 Casale et al.

July 7, 2019

De novo genome assembly of a Plasmodium falciparum NF54 clone using Single-Molecule Real-Time Sequencing.

Plasmodium falciparum is the species of human malaria parasite that causes the most severe form of the disease. Here, we used single-molecule real-time (SMRT) sequencing technology from Pacific Biosciences (PacBio) to sequence, assemble de novo, and annotate the genome of a P. falciparum NF54 clone. Copyright © 2018 Bryant et al.

July 7, 2019

Complete genome sequence of Dietziasp. Strain WMMA184, a marine coral-associated bacterium.

Dietzia sp. strain WMMA184 was isolated from the marine coralMontastraea faveolataas part of ongoing drug discovery efforts. Analysis of the 4.16-Mb genome provides information regarding interspecies interactions as it pertains to the regulation of secondary metabolism and natural product biosynthesis potential. Copyright © 2018 Braun et al.

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Complete genome sequence of Escherichia coli 81009, a representative of the sequence type 131 C1-M27 clade with a multidrug-resistant phenotype.

Draft genome sequence of Micromonospora sp. strain WMMA1996, a marine sponge-associated bacterium.

Complete genome sequence of a type strain of Mycobacterium abscessus subsp. bolletii, a member of the Mycobacterium abscessus complex.

High-quality complete genome sequences of three bovine Shiga toxin-producing Escherichia coli O177:H- (fliCH25) isolates harboring virulent stx2 and multiple plasmids.

Complete genome sequence of the model oleaginous alga Nannochloropsis gaditana CCMP1894.

Genome sequences of 12 Pseudomonas lundensis strains isolated from the lungs of humans.

Draft genome sequence of an active heterotrophic nitrifier-denitrifier, Cupriavidus pauculus UM1.

Draft genome sequence of Cyanobacterium sp. strain HL-69, isolated from a benthic microbial mat from a magnesium sulfate-dominated hypersaline lake.

Complete genome sequence of Methanobrevibacter smithii strain KB11, isolated from a Korean fecal sample.

Draft genome sequence of Bacillus sp. strain UFRGS-B20, a hydrocarbon degrader.

Complete genome sequences of Enterobacter cancerogenus CR-Eb1 and Enterococcus sp. strain CR-Ec1, isolated from the larval gut of the greater wax moth, Galleria mellonella.

Complete genome sequence of Pseudomonas sp. strain NC02, isolated from soil.

Complete genome sequence of Escherichia coli ML35.

De novo genome assembly of a Plasmodium falciparum NF54 clone using Single-Molecule Real-Time Sequencing.

Complete genome sequence of Dietziasp. Strain WMMA184, a marine coral-associated bacterium.

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