Data analysis

Unlock the potential of PacBio Single Molecule, Real-Time (SMRT) sequencing using our portfolio of tools to analyze, visualize and annotate your sequencing data.

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SMRT Analysis software

As part of SMRT Link, SMRT Analysis offers unparalleled computational power for all scientists analyzing SMRT sequencing data.

SMRT Analysis offers an easy-to-use graphical user interface, flexible command-line options, and an extensive set of APIs for streamlined integration with analytical workflows.

Learn more about SMRT Analysis

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PacBio DevNet

We work with bioinformatics experts to enable development of open-source software for analysis and annotation of SMRT sequencing data.

DevNet provides scientists with easy access to open-source community-developed analysis tools for PacBio data, SMRT sequencing data sets, and resources to help further your analysis and data interpretation.

Learn more about PacBio DevNet

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SMRT compatible analysis products

We have identified trusted analytical partners to expand the potential of your PacBio data and further your sequencing goals.

From compute infrastructure to tertiary analysis, these analytical partners offer a wide variety of solutions and services to complement our SMRT Analysis products.

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Analysis Tools by Application and Methods

The PacBio analytical portfolio can be applied across our applications. Learn more about these applications and analytical tools:

-                                Applications
+                                Analytical tools
-                                Whole genome sequencing – for humans, plants, animals and microbes including de novo sequencing and variant detection
+                                Whole genome sequencing analytical tools de novo assembly and variant detection
-                                RNA sequencing – in-depth analysis of cDNA sequences across the entire transcriptome or targeted genes
+                                RNA sequencing analytical tools utilize the Iso-Seq method for isoform detection and characterization
-                                Targeted sequencing – study relevant genome targets across the regions of interest
+                                Targeted sequencing analytical tools for structural variation, detection of rare SNPs, indels, haplotypes, and phasing
-                                Complex populations – understand variants among bacterial, viral and cancer cell populations
+                                Complex Populations analytical tools for de novo assembly, CCS, minor variant, and base modifications
-                                Epigenetics – detect DNA modifications in your samples while you sequence on the PacBio platform
+                                Epigenetic analytical tools for direct detection of base modifications and motif analysis by measuring kinetic variation during base incorporation

Multiplexing

Featured method

Multiplexing — enables long-read sequencing of multiple samples on the same SMRT Cell to increase throughput and enhance the efficiency of your research.