DATASETS

Explore these publicly available datasets generated with Single Molecule, Real-Time (SMRT) sequencing.

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Whole genome sequencing

Application Dataset Data type PacBio system
Variant detection, assembly, epigenetics Homo sapiens - GIAB sample HG002 with 5mC calls HiFi reads Sequel IIe system
Variant detection, assembly HiFi reads Sequel II system
Assembly HiFi reads Sequel II system
Assembly (low-DNA input) HiFi reads Sequel II system
Assembly (ultra-low DNA input) Phlebotomus papatasi, Homo sapiens, Drosophila melanogaster HiFi reads Sequel II system
Assembly Food safety and infectious microbes – 96 plex HiFi reads Sequel II system

COVID-19 sequencing

Application Dataset Data type PacBio system
SARS-CoV-2 surveillance Omicron samples HiFi reads Sequel II system
SARS-CoV-2 surveillance Synthetic RNA controls HiFi reads Sequel II system
SARS-CoV-2 surveillance Surveillance samples HiFi reads Sequel II system

RNA sequencing

Application Dataset Data type PacBio system
Whole transcriptome HiFi reads Sequel II system
Whole transcriptome HiFi reads Sequel II system

Metagenomics

Application Dataset Data type PacBio system
Metagenomic profiling and assembly HiFi reads Sequel II system
Metagenomic profiling and assembly HiFi reads Sequel II system
Full-length 16S sequencing HiFi reads Sequel II system

File formats

Dataset Data type PacBio system
HiFi reads Sequel IIe system
HiFi reads Sequel IIe system

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