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DATASETS

Explore these publicly available datasets generated with PacBio sequencing.

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Featured datasets

HUMAN WGS
REVIO SPRQ-NX

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Repeat expansion panel
on Vega system

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Full-length RNA
on Vega system

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Whole genome datasets     Targeted datasets     RNA datasets     Metagenomic datasets    AAV datasets      File formats

Whole genome sequencing + Epigenetics

Application Dataset Download literature Sequencing system
Whole genome sequencing Homo sapiens - HG002 Revio system - SPRQ-Nx chemistry
Whole genome sequencing Various plants + animals N/A Revio system - SPRQ-Nx chemistry
Whole genome sequencing (ultra-low DNA input) HG002-various polymerases Protocol Revio system - SPRQ-Nx chemistry
Whole genome sequencing - benchmarking Platinum Pedigree Kronenberg 2025 Revio system
Fiber-seq Homo sapiens - CHM13 App Note Revio system - SPRQ chemistry
Fiber-seq Homo sapiens - HG002 Blog Revio system - SPRQ chemistry
Whole genome sequencing - Variant detection, assembly, epigenetics GIAB - HG002 Explore Vega genome datasets Vega system
Whole genome sequencing Various plant & animals – California flannelbush, widow rockfish, and sea otter Explore Vega genome datasets Vega system
Tumor/normal Homo sapiens - GIAB HG008 pancreatic Cancer research Revio system - SPRQ chemistry and Vega system
Variant detection, assembly, epigenetics Homo sapiens - GIAB trio HG002-4 Application brief Revio system - SPRQ chemistry
Tumor/normal COLO829 melanoma Application note Revio system - SPRQ chemistry
Variant detection, assembly, epigenetics Homo sapiens — GIAB trio HG002-4 Application note Revio system
Tumor/normal COLO829 melanoma Application note Revio system
Tumor/normal HCC1395 Application note Revio system
Whole genome sequencing Various plant & animals – mouse, ladybug, oak, mistletoe, and maize Plant + animal biology Revio system

Targeted sequencing

Application Dataset Download literature Sequencing system
PureTarget 2.0 Carrier panel Nanobind 96plex Carrier panel app note Revio SPRQ
PureTarget 2.0 Carrier panel Coriell 16plex Carrier panel app note Revio SPRQ
PureTarget 2.0 Carrier panel Coriell 16plex Carrier panel app note Vega system
PureTarget 2.0 Repeat Expansion 2.0 Nanobind Coriell 48plex Repeat expansion app note Revio SPRQ
PureTarget 2.0 Repeat Expansion 2.0 Nanobind Coriell 48plex Repeat expansion app note Vega system
PureTarget Repeat expansion panel - Coriell samples Explore repeat expansion dataset Vega system
PureTarget Repeat expansion panel - Coriell samples PureTarget brochure Revio SPRQ
PureTarget Repeat expansion panel HG001 and HG002 48-plex PureTarget brochure Revio system
PureTarget Repeat expansion panel Coriell samples PureTarget brochure Sequel IIe system
PureTarget Repeat expansion panel RFC1 samples PureTarget brochure Sequel IIe system
Target enrichment Twist Alliance Dark Genes Panel HiFi sequencing with Twist Bioscience target enrichment Revio system
PureTarget Repeat expansion panel HG001 and HG002 8-plex PureTarget brochure Sequel IIe system
Target enrichment Twist Alliance Dark Genes Panel Twist Alliance Dark Genes Panel Sequel IIe system
Target enrichment Twist Alliance Long Read PGx Panel Twist Alliance Dark Genes panel Sequel IIe system
Target enrichment Twist Custom BRCA1/2 Panel HiFi sequencing with Twist Bioscience target enrichment Sequel IIe system
Amplicon sequencing CYP2D6 amplicon HiFi amplicon sequencing for pharmacogenetics: CYP2D6 Sequel IIe system

RNA sequencing

Application Dataset Download literature Sequencing system
Kinnex single-cell Homo sapiens - PBMC 10x Chromium Single Cell (5' and 3' libraries) Kinnex single-cell RNA application note Sequel II, Revio and Vega systems
Kinnex single-cell Homo sapiens - HG002 (10x 5') Kinnex single-cell RNA application note Revio system
Kinnex full-length RNA Homo sapiens - UHRR Explore Vega RNA datasets Vega system
Kinnex full-length RNA Homo sapiens - UHRR Kinnex full-length RNA application note Revio system - SPRQ chemistry
Kinnex full-length RNA Homo sapiens – UHRR Kinnex full-length RNA application note Sequel II and Revio systems
Kinnex full-length RNA Homo sapiens – HG002 Kinnex full-length RNA application note Revio system
Kinnex full-length RNA Homo sapiens - Heart Kinnex full-length RNA application note Revio system
Kinnex full-length RNA Homo sapiens - Cerebellum Kinnex full-length RNA application note Revio system
Kinnex full-length RNA Homo sapiens - brain Kinnex-IDT targeted tech note Revio system

Metagenomics

Application Dataset Download literature Sequencing system
Kinnex 16S rRNA ZymoBIOMICS Fecal Reference with TruMatrix Technology (human) Kinnex full-length 16S rRNA application note Sequel II and Revio systems
Kinnex 16S rRNA Mixture: ZymoBIOMICS Gut Microbiome Standard, ZymoBIOMICS Fecal Reference with TruMatrix™ Technology, ATCC 20 Strain Even Mix Genomic Material, ATCC 20 Strain Staggered Mix Genomic Material Kinnex full-length 16S rRNA application note Sequel II and Revio systems
Metagenomic profiling and assembly ZymoBIOMICS Fecal Reference with TruMatrix Technology (human) Microbiome and metagenome sequencing with HiFi reads Revio system
Metagenomic profiling and assembly ZymoBIOMICS Fecal Reference with TruMatrix Technology (human) Microbiome and metagenome sequencing with HiFi reads Sequel IIe system
Metagenomic profiling and assembly 20 strain mock microbial community – ATCC MSA-1003 – shotgun Microbiome and metagenome sequencing with HiFi reads Sequel II system
Metagenomic profiling and assembly Human gut microbiome pooled standards Microbiome and metagenome sequencing with HiFi reads Sequel IIe system
Full-length 16S sequencing 20 strain mock microbial community – ATCC MSA-1003 – 16S Microbiome and metagenome sequencing with HiFi reads Sequel II system
Metagenomic profiling and assembly (native WGS and AmpliFi: ultra-low DNA input) ZymoBIOMICS Fecal Reference with TruMatrix Technology (D6323) and ZymoBIOMICS Gut Microbiome Standard (D6331) Microbiome and metagenome sequencing with HiFi reads Revio and Vega systems

Gene therapy vectors

Application Dataset Download literature Sequencing system
AAV scAAV 8-plex – Vector Biolabs rh10-CBA-eGFP AAV sequencing with HiFi reads Sequel II system
AAV ssAAV – ViGene pAV-CMF-GFP AAV sequencing with HiFi reads Sequel II system
AAV ssAAV-scAAV 1:10 mixture AAV sequencing with HiFi reads Sequel II system
AAV ssAAV - Charles River - pAV-CMF-GFP AAV sequencing with HiFi reads Revio system

File formats

Dataset Data type PacBio system
Revio v13.3 run directory Directory Revio system

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