Revio system

Reveal more with accurate long-read sequencing at scale

UNLEASH THE POWER OF HIFI SEQUENCING

The Revio system adds affordability, high throughput, and ease of use to a foundation of long reads, exceptional accuracy, and direct methylation detection.

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15× increase in HiFi read throughput

With a high-density, 25 million ZMW SMRT Cell, up to 4 SMRT Cells in parallel, and 24-hour run times, the Revio system delivers 360 Gb of HiFi reads per day, equivalent to 1,300 human whole genomes per year. ​

The $1,000 complete, phased genome

HiFi sequencing provides small variants, structural variants, repeat expansions, methylation, and haplotype phasing from a single library and sequencing run. ​

50% fewer consumables and a vastly simplified experience

Operating the Revio system is simple, thanks to a combined reagent and sample plate, rapid run setup, flexibility to queue runs while sequencing is in progress, and no external nitrogen supply. ​

Google Health DeepConsensus on board

Advanced algorithms on the Revio system deliver the highest read accuracy plus methylation calling in every run. Its optimized file formats reduce data storage needs through quality value binning and smart read ordering.

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Image comparing Sequel IIe vs. Revio system scale - PacBio

HiFi sequencing at scale

With the Revio system, you can achieve higher throughput to support large studies and develop novel applications. The Revio system can generate 1,300 human genome equivalents per year, 15× more than the Sequel IIe system, via:

 

Revio system Sequel IIe system Increase
Higher density 25 million ZMW 8 million ZMW
Independent stages 4 1
Shorter run times 24 hrs 30 hrs 1.25×
15×

Simplified Consumables

The Revio system simplifies the HiFi sequencing experience with fewer consumables optimized for easy tracking and minimal waste. With workflow improvements, loading consumables takes under a minute at the instrument.

Revio polymerase kit

The polymerase kit contains optimized reagents to bind polymerase to 24 SMRTbell libraries in preparation for sequencing.

Revio SMRT Cell tray

One tray contains 4 high-density SMRT Cells, each with 25 million zero-mode waveguides.

Revio sequencing plate

The sequencing plate provides reagents for sequencing up to 4 Revio SMRT Cells and combines multiple parts from the Sequel IIe system: sequencing plate, sample plate, mixing plate, and SMRT Cell oil.

Image of Revio system polymerase consumable kit box - PacBio

A WORKFLOW BUILT FOR YOUR SCHEDULE

The Revio system gives you a vastly simplified experience with consumables and software designed for flexibility and convenience. Whether you’re a genome center or a small lab, you can enjoy:

Fast, reliable library preparation

Library prep for the Revio system supports manual and automated preps with SMRTbell prep kit 3.0.

Rapid run setup

Sequencing plates are linked automatically to run designs through an NFC tag, enabling runs to be set up in less than one minute on instrument.

Flexibility to fit your schedule

The Revio work deck is isolated from the four sequencing stages, leaving the system available up to 20 hours per day for loading consumables for subsequent runs.

MASSIVE COMPUTE POWER

The Revio system includes powerful NVIDIA GPUs, which provide more than 20× the compute power of the Sequel IIe system, to deliver accurate, ready-to-use data directly from the instrument.​

HiFi read generation

The GPUs provide rapid turnaround time for basecalling and HiFi read generation, directly outputting HiFi reads in BAM format.

Google Health DeepConsensus

DeepConsensus uses advanced deep learning techniques to further extend the accuracy and yield of HiFi sequencing.

Methylation calling

Standard runs include DNA methylation status, calculated with a deep learning algorithm that processes polymerase kinetics.

Demultiplexing

All fundamental processing steps are performed on instrument, including barcode demultiplexing.

 

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Image of Sequel vs. Revio accuracy - PacBio

HIFI LEVEL ACCURACY AND DATA QUALITY

The Revio system produces the same — and better — read length, quality, and variant calling performance that have made HiFi sequencing so celebrated.

Read length

HiFi reads are tens of kilobases long, providing the ability to resolve large variants and map to difficult regions of the genome.​

Read and base quality

The Revio system provides reliable answers through exceptional accuracy, with 90% of bases ≥Q30 and median read accuracy ≥Q30.​

Variant calling

HiFi sequencing on the Revio system delivers high accuracy for all variants types, matching the precisionFDA-winning accuracy of the Sequel IIe system.1

…the high-throughput capabilities of the Revio system will allow us to apply HiFi technology to a wider array of applications in agricultural biotechnology

— Gina Zastrow-Hayes, Biotechnology and GT-Genomics Technology Manager at Corteva Agriscience

How Revio long-read sequencing compares

PacBio Revio SBS sequencing Nanopore sequencing
Read length 15–18 kb 2x150 bp 10–100 kb
Read accuracy 99.95% (Q33) 99.92% (Q31) 99.26% (Q21)
Run time 24 hours 44 hours 72 hours
Yield 90 Gb 2,400–3,000 Gb 50–110 Gb
Variant calling — SNVs
Variant calling — indels
Variant calling — SVs
5mC methylation
Phasing

 

Workflow

Extraction

Nanobind DNA kits enable extraction of HMW gDNA from a variety of sample types.

Learn more

Library prep

SMRTbell prep kit 3.0 supports manual and automated library prep for effortless SMRTbell library creation.

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Sequencing

The Revio system offers simultaneous acquisition of 4 SMRT Cells on a 24-hour run, with flexible run scheduling to fit your schedule.

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Data analysis

Advanced algorithms from Google Health and cutting-edge NVIDIA GPUs allow for on-board processing of sequencing data, all with reduced output file sizes.

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More HiFi reads, more samples, more discovery

 

Sequencing specifications

HiFi yield2

Library
Run time3
1 SMRT Cell 4 SMRT Cells Base quality Methylation
15–18 kb 24 hours 90 Gb 360 Gb 90% ≥Q30 5mC at CpG sites

Application performance

HiFi reads enable a wide variety of applications with different coverage, read length, and accuracy requirements. Based on typical yields and coverage requirements, the performance for select popular applications is:

Throughput
Application Per Revio SMRT Cell
Per year4
Expected coverage5
Human genome 1 1,300 30×
Single-cell transcriptome 1 1,300 80 million reads
Large gene panel (20 Mb) 12 15,600 90% target positions ≥10×

Instrument specifications

Operating environment
Temperature 19–25°C (66–77°F)
Humidity 20–80% relative humidity, non-condensing
Ventilation 16,400 BTU/hr (4,800 W)
Dimensions
W × D × H 92.7 cm (36.5 in) × 90.2 cm (35.5 in) × 174.5 cm (68.7 in)
Weight 449 kg (989 lb)
Floor space 198.1 cm (78.0 in) × 138.5 cm (54.5 in)
Electrical power
Power requirements 200–240 VAC at 50-60 Hz, 30A
Compute
Network connection 1 GbE or 10 GbE, copper
Output file format hifi_reads.bam, ≈55 GB each, up to 72 TB per year

Download spec sheet     Access data sets

Frequently asked questions

The Revio system is available to order now. The first systems will ship to customers in the first quarter of 2023. We recommend placing orders now to ensure earliest delivery.

U.S. list price is $995 for sequencing reagents for one Revio SMRT Cell, which has an expected yield of 90 Gb, equivalent to a 30X human genome. Your local sales representative can provide detailed pricing in your currency.

Yes. The same library prep protocols are available for the Sequel systems and the Revio system. Therefore, SMRTbell libraries can be used across systems. However, the sequencing reagents — polymerase/binding kit, sequencing plate, and SMRT Cell tray — are specific to each system.

Yes. The hifi_reads.bam format continues to adhere to the SAM specification. The Revio BAM format has minor differences – for data size efficiency – in base quality encoding and read sort order.

Yes. Example datasets are located here.

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This is your moment

See it all at scale with the Revio system.

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  1. Data shown is for a single Revio SMRT Cell for HG002/GM24385.
  2. HiFi yield specification based on HG002/GM24385 human DNA extracted with Nanobind CBB kit and prepared with SMRTbell prep kit 3.0.
  3. Run time specification is for the sequencing reaction.
  4. Annual throughput is based on 1,300 Revio SMRT Cells.
  5. Expected coverages and throughputs are estimates. Coverage may vary based on library quality and fragment lengths.

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If you have a question, need to check the status of an order, or are interested in purchasing an instrument, we're here to help.