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Revio system

Achieve the most affordable and complete long-read genome

Revio long-read sequencing system advantages

 

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Most affordable, complete, phased genome

HiFi reads combine long-read length with high accuracy, replacing multiple assays and confidently resolving complex regions beyond the limits of short reads and nanopore methods. ~$345* human genome at 20x coverage with SPRQ-Nx. List pricing in USD. Regional pricing may differ. Contact your PacBio sales rep.

HiFi sequencing at scale, with less DNA input

Built for population-scale studies and programs that don’t pause. Run up to ~2,500 human whole genomes per year, up to 480 Gb of HiFi reads per day, and up to 4 SMRT Cells simultaneously with configurable run times and flexible scheduling — so sequencing keeps pace with your science.

On-instrument multiomic insight, included

Every standard run delivers on-instrument 5mC, 5hmC, and 6mA methylation calling—at no additional cost or bisulfite treatment—giving you access to genomic and epigenetic data from a single sample.

Confidence in every run, without the complexity

HiFi accuracy powered by SPRQ-Nx chemistry and Google Research DeepConsensus, paired with an easy, automation-ready workflow supported by compatible partners—so you get reliable results with minimal hands-on time.

SPRQ-NX chemistry - Available now

The Revio system runs on SPRQ chemistry and helps you achieve more with less DNA, empowering you to make more discoveries faster and more affordably. New SPRQ-Nx extends SPRQ chemistry with improved consistency, a new 5hmC methylation caller, and multi-use SMRT Cells, enabling a richer and cost-effective HiFi workflow. Built for projects that scale, it maintains the gold-standard HiFi quality you rely on, from population studies to routine panels.

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Better economics with same quality

~30% LOWER COST PER GENOME WITH SPRQ-NX

Per genome cost at 20x coverage based on 2026 reagent list price*.

*At scale pricing with volume discounts can reach ~$300 per genome. Contact your PacBio sales rep. Study design, sample type, and level of multiplexing may affect the number of SMRT Cells required. All prices are listed in USD and costs may vary by region.  Pricing includes sequencing reagents run on your system and does not include instrument amortization or other reagents.

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POPULATION-SCALE GENOMES WITHOUT THE PRICE TAG

Total sequencing reagent cost for 10,000 human WGS at 20x. Access the app brief to learn more.

 

*Sequencing reagent cost only. Excludes library prep, instrument capital, labor, sequencing-core overhead, and downstream data storage/compute.

POPULATION-SCALE STUDIES

Estonia National Biobank selects PacBio to sequence 10,000 whole genomes

HiFi data generated on the Revio system will support the EU and Estonian government-funded Center for Personalized Medicine to enable discoveries across cardiology, mental and reproductive health, drug response, cancer research and rare diseases.

PacBio and GeneDx Launch Research Collaboration with the University of Washington

This study is first of its kind to compare diagnostic rates across short- and long-read sequencing platforms to understand the potential for increased diagnostic yield in neonatal care.

Ambry Genetics and PacBio Announce Collaboration to Sequence Up to 7,000 Human Genomes

Consortium selects leading genomics companies to support pediatric Mendelian Genomics Research Center Program aimed at providing insights for families battling rare diseases.

SPRQ-NX: HEAR FROM YOUR PEERS

Expanded multiomic insight

SPRQ-Nx adds 5hmC detection and strengthens 5mC and 6mA methylation calling with no additional prep.

Key applications and sample throughput with SPRQ-Nx chemistry

The Revio system supports a variety of applications that benefit from accurate long HiFi reads and 500 ng input DNA requirement. Its four independent stages allow different samples and applications to be sequenced in parallel. A subset of key applications is:

Library Application Per Revio SMRT Cell
Per yeara
Expected coverageb
0.5-5 kbc Amplicon sequencing > 1,000 > 2.5 million 50x
5-10 kb Microbial genome 384 480,000 30x
5-15 kb PureTarget panels 96 96,000 >100x mean per target
5-10 kb Ampli-Fi human genome 1 1,250 20x
15-20 kb Human genome 2 2,500 20x
15-20 kb Human methylation profiling 8 10,400 5x
15-20 kb Transcriptome with Kinnex full-length RNA kit 6 7,500 10 million reads
  1. Annual throughput is based on 2,500 Revio SMRT Cells for 12 hour runs; 1,250 for 24 hour runs. Adaptive loading – which increases the consistency of yield per SMRT Cell – adds about 4 hours to run time, affecting the maximum number of SMRT Cells per year. 
  2. Expected coverages are estimates. 
  3. 0.5-5kb amplicon sequencing performance with SPRQ-Nx chemistry based on single-use SMRT Cells

See what you can do with one HiFi run   Access data sets

“HiFi long read sequencing can now produce the most comprehensive variant dataset obtainable by a single technology in a single laboratory, allowing accurate calling of substitutions, indels, STRs and SVs.”

 

– Kucuk et al., Genome Med, 2023

More HiFi reads, more samples, more discovery

System specifications with SPRQ-Nx chemistry

The Revio system utilizes nanofabricated Revio SMRT Cells and has four independent stages, allowing sequencing of multiple SMRT Cells in parallel. The onboard compute provides accurate basecalling with Google DeepConsensus, plus methylation calling in every run.

Library
Run timea
Q30+ bases

HiFi yield per SMRT Cellb

Methylation
0.5-5 kbd 12 hours 95% 6-8 million reads 5mC and 5hmC at CpG sites and 6mA for native DNAc
5-10 kb 24 hours 90% 35-70 Gb
10-15 kb 70-100 Gb
15-20 kb 100-120 Gb
20-25 kb 30 hours 85% 100-120 Gb
  1. Run time refers to the data collection step, which determines the time between processing SMRT Cells.
  2. HiFi yield is dependent on library quality and sequencing preparation procedures.  Specified yield is based on high-quality samples prepared following best practices. 
  3. The Revio 6mA caller is designed to detect methylation in the context of the Fiber-seq chromatin assay.
  4. Libraries 0.5-5kb are supported only with single acquisition Revio SMRT Cells with either SPRQ or SPRQ-Nx chemistry.

Download spec sheet

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A WORKFLOW BUILT FOR YOUR SCHEDULE

The Revio system gives you a vastly simplified experience with consumables and software designed for flexibility and convenience. Whether you’re a genome center or a small lab, you can enjoy:

Fast, reliable library preparation

Library prep for the Revio system supports manual and automated prep. Learn more

Rapid run setup

Sequencing plates are linked automatically to run designs through an NFC tag, enabling runs to be set up in less than one minute on instrument.

Flexibility to fit your schedule

The Revio work deck is isolated from the four sequencing stages, leaving the system available up to 20 hours per day for loading consumables for subsequent runs.

Multi-use workflow efficiency

SMRT Cells are automatically washed, handled, and tracked on-instrument between uses, reducing manual intervention and downtime.

A smarter workflow with a lighter footprint

Reduce waste and increase productivity with automated consumable reuse designed to deliver more HiFi data while simplifying your workflow.

 

SPRQ-Nx Chemistry: Now Available

Reduce waste and increase productivity with automated consumable reuse designed to deliver more HiFi data while simplifying your workflow.

 

Consistent trusted HiFi performance

The Revio system with SPRQ-Nx chemistry produces exceptional read length, quality, and variant calling performance that have made HiFi sequencing so celebrated.

Reveal a more complete genome

The complete, gapless human genome marks a new era of genomics where no region of the genome is beyond your reach. In 2021, PacBio HiFi technology was used by the Telomere-to- Telomere (T2T) Consortium to fill in those gaps.

Read length

HiFi reads are tens of kilobases long, providing the ability to resolve large variants and map to difficult regions of the genome.

Read and base quality

The Revio system provides reliable answers through exceptional accuracy, with 90% of bases Q30+ and median read accuracy ≥Q30.

Variant calling

HiFi sequencing with SPRQ-Nx chemistry on the Revio system delivers high accuracy variant detection, resulting in fewer sequencing errors relative to other technologies at lower coverage1.

How HiFi long-read sequencing compares

PacBio HiFi sequencing SBS sequencing Nanopore sequencing
Read length

15-20 kb5

2x150 bp 10–100 kb
Read accuracy

99.95% (Q33)1

99.92% (Q31)3

98.90% (Q19)4

Run time

24 hours2

44 hours 72 hours
Yield

120 - 480 Gb2

2,400–3,000 Gb 50–110 Gb
Coverage Unbiased Reduced at low and high (GC) Reduced in low-complexity runs

Genome completeness6

X

Variant calling – SNVs, Indels, SVs5

X
X
Areas of high homology
X
X
Phasing
X
Methylation Every run Via library prep Every run

1. Read accuracy PacBio HiFi: precisionFDA Truth Challenge V2
2. HiFi yield specification based on HG002/GM24385 human DNA extracted with Nanobind CBB kit and prepared with SMRTbell prep kit 3.0. Run time specification is for the sequencing reaction. HiFi yield is dependent on library fragment size. Yield is typically lower for shorter libraries.

3. Illumina: HG002 2×150 bp NovaSeq library, precisionFDA Truth Challenge V2
4. ONT: Q20+ chemistry (R10.4, Kit 12), Oct 2021 GM24385 Q20+ Simplex dataset release
5. Shafin Nat Methods 2021 (https://doi.org/10.1038/s41592-021-01299-w)
6. Cheng 2021 Nat Methods (https://doi.org/10.1038/s41592-020-01056-5) and Shafin 2020 Nat Biotech (https://doi.org/10.1038/s41587-020-0503-6)

 

MASSIVE COMPUTE POWER

The Revio system includes powerful NVIDIA GPUs to deliver accurate, ready-to-use data directly from the instrument.

HiFi read generation

The GPUs provide rapid turnaround time for basecalling and HiFi read generation, directly outputting HiFi reads in BAM format.

Google Research DeepConsensus

DeepConsensus combines deep learning with innovations from AlphaEvolve, Google’s AI coding agent, to extend the accuracy and yield of HiFi sequencing.

Methylation calling (5mC, 5hmC, and 6mA)

Standard runs include DNA methylation status, calculated with a deep learning algorithm that processes polymerase kinetics.

Demultiplexing

All fundamental processing steps are performed on instrument, including barcode demultiplexing.

HiFi Workflow

Extraction

Nanobind DNA kits enable extraction of HMW gDNA from a variety of samples: saliva, cultured cells, bacteria, whole blood, tissue, plant nuclei, and insect.

Learn more

Library prep

SMRTbell prep kit 3.0, HiFi prep kits, and application kits (Kinnex, PureTarget) support manual and automated library prep for effortless SMRTbell library creation.

Learn more

Sequencing

Built for scale and flexibility, Revio lets you run 4 SMRT Cells at once, and scheduling that fits your lab.

Learn more

Data analysis

Advanced algorithms from Google Research and cutting-edge NVIDIA GPUs allow for on-board processing of sequencing data, all with reduced output file sizes.

Learn more

Instrument specifications

Operating environment
Temperature 19–25°C (66–77°F)
Humidity 20–80% relative humidity, non-condensing
Ventilation 13,000 BTU/hr (3,800 W)
Dimensions
W × D × H 92.7 cm (36.5 in) × 91.4 cm (36.0 in) × 174.5 cm (68.7 in)
Weight 465 kg (1,025 lb)
Floor space 243.8 cm (96.0 in) × 138.5 cm (54.5 in)
Electrical power
Power requirements 200–240 VAC at 50-60 Hz, max 5 kVA/4.8 kW/24A
Compute
Network connection 1 GbE or 10 GbE, copper
Output file format hifi_reads.bam, ~60 GB each, up to 78 TB per year

Frequently asked questions

HiFi sequencing is a single-molecule long-read technology that produces highly accurate, long DNA reads by combining multiple passes of the same molecule into a consensus sequence, allowing you to resolve complex genomic regions and close gaps in your data.

HiFi sequencing delivers high-accuracy long reads with 99.95% read accuracy (Q33), compared to 99.92% (Q31) for short-read sequencing. HiFi enables accurate detection of SNVs, indels, and structural variants, including in difficult-to-map regions of the genome, along with native phasing and methylation detection.

SPRQ-Nx chemistry delivers the most affordable long-read genome, at approximately ~$345 per human genome at 20x coverage (~$300 at scale), representing about 30% reagent cost savings compared to previous chemistry.

A single SPRQ-Nx acquisition can generate:

  • Up to 120 Gb of total HiFi long-read sequencing data in 24 hours.
  • Two phased 20x human whole genome.
  • One sample with ~80 million full-length RNA isoforms using the Kinnex single-cell RNA kit.
  • 16 samples using large, targeted gene panels such as the Dark Gene.
  • 96 samples using small, targeted gene panels similar to the Twist Alliance Long-read PGx.
  • 16 communities of metagenome assembled genomes.

Expected coverage and throughput are estimates. Coverage and total reads/data may vary based on library quality and fragment lengths.

SPRQ-Nx is an updated HiFi sequencing chemistry for the Revio system that enables multi-use SMRT Cells, reducing cost per human genome to $345 at 20x coverage. It adds 5hmC methylation detection, improves 5mC and 6mA detection performance, and delivers more consistent yield and accuracy across runs, all with the same workflow.

The Revio system outputs ready-to-use HiFi reads in BAM format. All fundamental processing steps are performed on instrument, including barcode demultiplexing.

Want information about the Revio system?

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Revio system resources

SPRQ-Nx app brief

Download PDF

SPRQ-Nx scaling webinar

Watch on-demand

How to set up a run on Revio

Watch video

Commonly asked questions about HiFi

Read blog

Public benchmarks

HG002, GIAB datasets

Revio system documentation

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Powered by HiFi publications

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Service plans + support

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