Industrial biotechnology Archives - Page 72 of 80

July 7, 2019

Complete genome sequence of the high-natamycin-producing strain Streptomyces gilvosporeus F607.

Streptomyces gilvosporeus strain F607 is a producer of high levels of natamycin used in the fermentation industry. In this study, the complete genome sequence of strain F607 was determined. This genome sequence provides a basis for understanding natamycin biosynthesis and regulation in a high-natamycin-producing strain and will aid in the development of useful strategies for improving industrial strains.

July 7, 2019

Complete genome sequence of Kyrpidia sp. strain EA-1, a thermophilic knallgas bacterium, isolated from the Azores.

Kyrpidia sp. strain EA-1 is a thermophilic hydrogen-oxidizing bacterium isolated from hydrothermal systems at São Miguel Island, Portugal. Here, we present the complete genome sequence of the strain assembled to a single circular chromosome. The genome spans 3,352,175 bp, with a GC content of 58.7%. Copyright © 2018 Reiner et al.

July 7, 2019

Complete genome sequence of Sphingorhabdus sp. YGSMI21, exhibiting high enantioselective epoxide hydrolase activity.

Sphingorhabdus sp. YGSMI21 is a novel strain exhibiting high enantioselective hydrolysis activity for styrene oxide. Here, we present its complete genome sequence, consisting of one circular chromosome (3.86 Mb) and one plasmid (0.196 Mb). Copyright © 2018 Kim et al.

July 7, 2019

Complete genome sequence of Lactococcus lactis subsp. lactis G50 with immunostimulating activity, isolated from Napier grass.

Lactococcus lactis subsp. lactis G50 is a strain with immunostimulating activity, isolated from Napier grass (Pennisetum purpureum). We determined the complete genome sequence of this strain using the PacBio RS II platform. The single circular chromosome consists of 2,346,663?bp, with 35.03% G+C content and no plasmids. Copyright © 2018 Nakano et al.

July 7, 2019

Draft genome sequence of Micromonospora sp. strain WMMA1996, a marine sponge-associated bacterium.

Micromonospora sp. strain WMMA1996 was isolated in 2013 off the coast of the Florida Keys, United States, from a marine sponge as part of bacterial coculture-based drug discovery initiatives. Analysis of the ~6.44-Mb genome reveals this microbe’s potential role in the discovery of new drugs. Copyright © 2018 Braun et al.

July 7, 2019

Complete genome sequence of the model oleaginous alga Nannochloropsis gaditana CCMP1894.

The model oleaginous alga Nannochloropsis gaditana was completely sequenced using a combination of optical mapping and next-generation sequencing technologies to generate one of the most complete eukaryotic genomes published to date. The assembled genome is 30.7?Mb long.

July 7, 2019

Draft genome sequence of an active heterotrophic nitrifier-denitrifier, Cupriavidus pauculus UM1.

Here, we present the draft genome sequence ofCupriavidus pauculusUM1, a metal-resistant heterotrophic nitrifier-denitrifier capable of synthesizing nitrite from pyruvic oxime. The size of the genome is 7,402,815 bp with a GC content of 64.8%. This draft assembly consists of 38 scaffolds. Copyright © 2018 Putonti et al.

July 7, 2019

Draft genome sequence of Rhodococcus sp. strain M8, which can degrade a broad range of nitriles.

Rhodococcus sp. strain M8 is a nitrile-degrading bacterium isolated from acrylonitrile-contaminated sites. This strain produces the enzymes for sequential nitrile degradation, cobalt-type nitrile hydratase, and amidase in large amounts. Its draft genome sequence, announced here, has an estimated size of 6.3 Mbp.

July 7, 2019

Draft genome sequence of Cyanobacterium sp. strain HL-69, isolated from a benthic microbial mat from a magnesium sulfate-dominated hypersaline lake.

The complete genome sequence ofCyanobacteriumsp. strain HL-69 consists of 3,155,247 bp and contains 2,897 predicted genes comprising a chromosome and two plasmids. The genome is consistent with a halophilic nondiazotrophic phototrophic lifestyle, and this organism is able to synthesize most B vitamins and produces several secondary metabolites. Copyright © 2018 Mobberley et al.

July 7, 2019

Draft genome sequence of Bacillus sp. strain UFRGS-B20, a hydrocarbon degrader.

Bacillus sp. strain UFRGS-B20 was isolated in 2012 from Brazilian land-farming soil contaminated with petrochemical oily sludge. This strain was subjected to hydrocarbon biodegradation tests, showing degradation rates of up to 60%. Here, we present the 6.82-Mb draft genome sequence of the strain, which contains 2,178 proteins with functional assignments.

July 7, 2019

Complete genome sequence of Pseudomonas sp. strain NC02, isolated from soil.

We report here the complete genome sequence of Pseudomonas sp. strain NC02, isolated from soil in eastern Massachusetts. We assembled PacBio reads into a single closed contig with 132× mean coverage and then polished this contig using Illumina MiSeq reads, yielding a 6,890,566-bp sequence with 61.1% GC content. Copyright © 2018 Cerra et al.

July 7, 2019

Complete genome sequence of Dietziasp. Strain WMMA184, a marine coral-associated bacterium.

Dietzia sp. strain WMMA184 was isolated from the marine coralMontastraea faveolataas part of ongoing drug discovery efforts. Analysis of the 4.16-Mb genome provides information regarding interspecies interactions as it pertains to the regulation of secondary metabolism and natural product biosynthesis potential. Copyright © 2018 Braun et al.

July 7, 2019

Complete genome sequence of Thermoanaerobacterium sp. strain RBIITD, a butyrate- and butanol-producing thermophile.

Thermoanaerobacterium sp. strain RBIITD was isolated from contaminated rich growth medium at 55°C in an anaerobic chamber. It primarily produces butyrate as a fermentation product from plant biomass-derived sugars. The whole-genome sequence of the strain is 3.4 Mbp, with 3,444 genes and 32.48% GC content.

July 7, 2019

Complete genome sequence and methylome analysis of Bacillus caldolyticus NEB414.

Bacillus caldolyticus NEB414 is the original source strain for the restriction enzyme BclI. Its complete sequence and full methylome were determined using single-molecule real-time sequencing. Copyright © 2018 Fomenkov et al.

July 7, 2019

Complete genome sequence of industrial dairy strain Streptococcus thermophilus DGCC 7710.

We report here the complete genome sequence of Streptococcus thermophilus DGCC 7710. S. thermophilus is widely used in industrial dairy production.

Auto Tag: Industrial biotechnology

Complete genome sequence of the high-natamycin-producing strain Streptomyces gilvosporeus F607.

Complete genome sequence of Kyrpidia sp. strain EA-1, a thermophilic knallgas bacterium, isolated from the Azores.

Complete genome sequence of Sphingorhabdus sp. YGSMI21, exhibiting high enantioselective epoxide hydrolase activity.

Complete genome sequence of Lactococcus lactis subsp. lactis G50 with immunostimulating activity, isolated from Napier grass.

Draft genome sequence of Micromonospora sp. strain WMMA1996, a marine sponge-associated bacterium.

Complete genome sequence of the model oleaginous alga Nannochloropsis gaditana CCMP1894.

Draft genome sequence of an active heterotrophic nitrifier-denitrifier, Cupriavidus pauculus UM1.

Draft genome sequence of Rhodococcus sp. strain M8, which can degrade a broad range of nitriles.

Draft genome sequence of Cyanobacterium sp. strain HL-69, isolated from a benthic microbial mat from a magnesium sulfate-dominated hypersaline lake.

Draft genome sequence of Bacillus sp. strain UFRGS-B20, a hydrocarbon degrader.

Complete genome sequence of Pseudomonas sp. strain NC02, isolated from soil.

Complete genome sequence of Dietziasp. Strain WMMA184, a marine coral-associated bacterium.

Complete genome sequence of Thermoanaerobacterium sp. strain RBIITD, a butyrate- and butanol-producing thermophile.

Complete genome sequence and methylome analysis of Bacillus caldolyticus NEB414.

Complete genome sequence of industrial dairy strain Streptococcus thermophilus DGCC 7710.

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