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SMRT分析软件加强您的遗传见解

SMRT分析软件为PacBio系统支持的各个研究领域提供分析解决方案。SMRT分析软件可选择直观的图形用户界面或灵活的命令行界面,也可通过大量应用程序接口(API)与您现有的分析流程轻松整合。

SMRT分析软件包括:

SMRT Portal

这种基于浏览器的开源应用程序让您能够创建、提交和监控二级分析任务,并查看或下载分析结果。您还能够管理二级分析方案和参考序列。

SMRT Portal以行业标准的输出格式生成了富含数据的特定实验报告。所有数据文件都可通过SMRT Portal直接访问,从而轻松实现第三方软件分析及合作。

此工具有以下功能:

  • 将序列与参考序列比对并检出变异
  • 将序列从头 组装成基因组
  • 分析RNA测序数据
  • 开展DNA甲基化分析

SMRT分析软件的API

SMRT分析软件通过一整套基于REST的二级分析网络服务API提供广泛的集成功能。您可利用API将SMRT分析软件与您的LIMS、内部和第三方应用程序或数据挖掘流程相整合。

SMRT View

SMRT View是一个可扩展的基因组浏览器,让您能够查看二级分析的测序数据并与之交互。它也是第一个数据可视化应用程序,能够显示PacBio SMRT技术独有的动力学和结构信息。

此软件包括:

  • 灵活直观的用户界面,为浏览和探索实验结果提供广泛选项
  • 变异、质量值及其它质量指标的交互式图形呈现
  • 丰富的注释,让您能够查看低至SNP水平的基因组数据集,快速验证您的结果

分析应用程序

SMRT分析软件包含一整套基因组分析的应用程序,包括从头组装、变异检出、转录组分析和表观基因组分析。

更多资源

PacBio软件下载

SMRT分析软件的版本说明

SMRT分析软件的系统要求

SMRT分析软件的安装

SMRT分析软件的网络服务API

 

若有意了解如何运用SMRT测序来支持您的测序工作,请联系我们