September 22, 2019  |  

The complete chloroplast genome sequence of Coix lacryma-jobi L.(Poaceae), a cereal and medicinal crop

Authors: Kang, Sang-Ho and Lee, Hyun Oh and Shin, Myung Ju and Kim, Nam-Hoon and Choi, Beom-Soon and Kumar, Manu and Ali, Asjad and Lee, Sang-Choon and Kim, Chang-Kug

Coix lacryma-jobi is a cereal and medicinal crop belonging to the Poaceae family. This study characterized complete chloroplast genome sequence of a Korean cultivar Johyun of C. lacryma-jobi var. ma-yuen through the de novo hybrid assembly with Illumina and PacBio genomic reads. The chloroplast genome is 140,863?bp long and composed of large single copy (82,827?bp), small single copy (12,522?bp), and a pair of inverted repeats (each 22,757?bp). A total of 123 genes including 87 protein-coding genes, 32 tRNA genes, and four rRNA genes were predicted in the genome. Phylogenetic analysis confirmed a close relationship of C. lacryma-jobi with species in the Panicoideae subfamily of the Poaceae family.

Journal: Mitochondrial DNA Part B
DOI: 10.1080/23802359.2018.1507653
Year: 2018

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