SMRT Sequencing Datasets
Explore these publicly available datasets generated with Single Molecule, Real-Time (SMRT) Sequencing.
Additional information about each dataset can be found by clicking the dataset link. All datasets listed on this page are available for use without need for further permission.
Whole Genome Sequencing |
Application | Dataset | Data Type | PacBio System |
Variant detection, Assembly | Homo sapiens – GIAB sample HG002 | HiFi Reads | Sequel II System |
Assembly | Oryza sativa – MH63 | HiFi Reads | Sequel II System |
Assembly (Low DNA input) | Anopheles gambiae – 2 plex | HiFi Reads | Sequel II System |
Assembly (Ultra-low DNA input) | Phlebotomus papatasi, Homo sapiens, Drosophila melanogaster | HiFi Reads | Sequel II System |
Assembly | Microbial Multiplexing Data Set – 48 plex | Long reads | Sequel II System |
Learn more about whole genome sequencing applications
RNA Sequencing |
Application | Dataset | Data Type | PacBio System |
Whole transcriptome | Homo sapiens – Brain with Alzheimer’s Disease | HiFi reads | Sequel II System |
Whole transcriptome | Homo sapiens – Universal Human Reference RNA (UHRR) | HiFi reads | Sequel II System |
Learn more about RNA sequencing applications
Targeted Sequencing |
Application | Dataset | Data Type | PacBio System |
No-Amp Targeted Sequencing | Homo sapiens – Repeat expansions in HTT and FMR1 genes | HiFi reads | Sequel II System |
Learn more about targeted sequencing applications
Complex Populations
|
Application | Dataset | Data Type | PacBio System |
Viral sequencing | SARS-CoV-2 – ATCC Control with Eden Primers | HiFi reads | Sequel II System |
Metagenomic profiling and assembly | 20 Strain Mock Microbial Community – ATCC MSA-1003 – Shotgun | HiFi reads | Sequel II System |
Full-length 16S sequencing | 20 Strain Mock Microbial Community – ATCC MSA-1003 – 16S | HiFi reads | Sequel II System |
Learn more about complex populations applications
- Have questions about these datasets or SMRT Sequencing in general? Connect with a PacBio scientist
- Would you like to run a project? Request a free project consultation or find a Certified Service Provider