July 7, 2019  |  

SureMap: Versatile, error tolerant, and high sensitive read mapper

Authors: Rezaei Seraji, MohammadJavad and Motahari, Seyed Abolfazl

SureMap is a versatile, error tolerant and high sensitive read mapper which is able to map "difficult" reads, those requiring many edit operations to be mapped to the reference genome, with acceptable time complexity. Mapping real datasets reveal that many variants unidentifiable by other mappers can be called using Suremap. Moreover, SureMap has a very good running time and accuracy in aligning very long and noisy reads like PacBio and Nanopore against a reference genome.

Journal: BioRxiv
DOI: 10.1101/173740
Year: 2017

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