July 7, 2019  |  

IWTomics: testing high-resolution sequence-based ‘Omics’ data at multiple locations and scales.

Authors: Cremona, Marzia A and Pini, Alessia and Cumbo, Fabio and Makova, Kateryna D and Chiaromonte, Francesca and Vantini, Simone

With increased generation of high-resolution sequence-based 'Omics' data, detecting statistically significant effects at different genomic locations and scales has become key to addressing several scientific questions. IWTomics is an R/Bioconductor package (integrated in Galaxy) that, exploiting sophisticated Functional Data Analysis techniques (i.e. statistical techniques that deal with the analysis of curves), allows users to pre-process, visualize and test these data at multiple locations and scales. The package provides a friendly, flexible and complete workflow that can be employed in many genomic and epigenomic applications.IWTomics is freely available at the Bioconductor website (http://bioconductor.org/packages/IWTomics) and on the main Galaxy instance (https://usegalaxy.org/).Supplementary data are available at Bioinformatics online.

Journal: Bioinformatics
DOI: 10.1093/bioinformatics/bty090
Year: 2018

Read Publication

Talk with an expert

If you have a question, need to check the status of an order, or are interested in purchasing an instrument, we're here to help.