July 7, 2019  |  

Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge.

Authors: Gusev, Oleg and Suetsugu, Yoshitaka and Cornette, Richard and Kawashima, Takeshi and Logacheva, Maria D and Kondrashov, Alexey S and Penin, Aleksey A and Hatanaka, Rie and Kikuta, Shingo and Shimura, Sachiko and Kanamori, Hiroyuki and Katayose, Yuichi and Matsumoto, Takashi and Shagimardanova, Elena and Alexeev, Dmitry and Govorun, Vadim and Wisecaver, Jennifer and Mikheyev, Alexander and Koyanagi, Ryo and Fujie, Manabu and Nishiyama, Tomoaki and Shigenobu, Shuji and Shibata, Tomoko F and Golygina, Veronika and Hasebe, Mitsuyasu and Okuda, Takashi and Satoh, Nori and Kikawada, Takahiro

Anhydrobiosis represents an extreme example of tolerance adaptation to water loss, where an organism can survive in an ametabolic state until water returns. Here we report the first comparative analysis examining the genomic background of extreme desiccation tolerance, which is exclusively found in larvae of the only anhydrobiotic insect, Polypedilum vanderplanki. We compare the genomes of P. vanderplanki and a congeneric desiccation-sensitive midge P. nubifer. We determine that the genome of the anhydrobiotic species specifically contains clusters of multi-copy genes with products that act as molecular shields. In addition, the genome possesses several groups of genes with high similarity to known protective proteins. However, these genes are located in distinct paralogous clusters in the genome apart from the classical orthologues of the corresponding genes shared by both chironomids and other insects. The transcripts of these clustered paralogues contribute to a large majority of the mRNA pool in the desiccating larvae and most likely define successful anhydrobiosis. Comparison of expression patterns of orthologues between two chironomid species provides evidence for the existence of desiccation-specific gene expression systems in P. vanderplanki.

Journal: Nature communications
DOI: 10.1038/ncomms5784
Year: 2014

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