Researchers Now Have the First Ever Tool to Detect Epigenetic and
Other DNA Modifications Simultaneously within the Sequencing Workflow
new and unique solution to detect DNA base modifications associated with
epigenetic regulation and DNA damage using the PacBio® RS High
Resolution Genetic Analyzer.
DNA base modifications such as methylation have an important role in a
wide variety of biological processes such as growth and aging, immunity,
bacterial pathogenicity, and disease development. The new analysis
software for the PacBio® RS enables customers to
detect and visualize these DNA modifications. The software works by
measuring the rate of DNA base incorporation during sequencing. This
information, automatically gathered during the sequence process, is a
unique feature of the company’s single molecule, real-time (SMRT®)
technology.
“We are pleased to provide the first and only tool that offers
researchers worldwide the ability to detect base modifications as an
integral part of the sequencing workflow,” said
Vice President of Market Development at Pacific Biosciences. “This is a
major milestone for Pacific Biosciences and a valuable new tool for the
scientific community.”
The SMRT Analysis software upgrade is available to scientists through a
free download from PacBio’s DevNet portal. The analysis tool works on
any data generated by the PacBio RS with its latest C2 chemistry,
enabling researchers to re-analyze existing data to detect methylation
and other base modifications.
More than 20 biologically important DNA base modifications are known,
and new types continue to be discovered. The initial software release
simplifies the process of detecting these modification events in native
genomic DNA through a user-friendly analysis and visualization
interface. Guidelines on studying the methylomes of bacteria, including
N6-methyladenine and N4-methylcytosine, are also available on the
company’s website at www.pacb.com/basemod.
“Modifications such as methylation have been shown to be critical in
influencing disease onset and severity, the pathogenicity of bacteria,
and gene regulation,” said
for Genomics and Multiscale Biology at
Science Officer at Pacific Biosciences. “The work we have done using
SMRT sequencing to resolve the German E. coli outbreak strain,
for example, points to a crucial role for base modification in the
regulation of a gene associated with the strain’s severity. If we aren’t
looking at base modifications, we aren’t seeing the whole picture in the
biology of pathogens.”
Dr. Schadt is speaking today about his work using the SMRT technology
during the President’s Forum at the annual
Microbiology’s 112th General Meeting in
talk is entitled, “Whole-genome Characterization of Methyladenine
Residues in Highly Pathogenic Strains of E. coli and V.
cholerae and Their Impact on Function.”
About Pacific Biosciences
RS, a high resolution genetic analyzer, to help scientists solve
genetically complex problems. Based on its novel single molecule,
real-time (SMRT®) technology, the company’s products enable:
targeted sequencing to more comprehensively characterize genetic
variations; de novo genome assembly to more fully identify,
annotate and decipher genomic structures; and DNA base modification
identification to help characterize epigenetic regulation and DNA
damage. By providing access to genetic information that was previously
inaccessible, Pacific Biosciences enables scientists to increase their
understanding of biological systems.
Forward-Looking Statements
This press release contains forward-looking statements. Forward-looking
statements may contain words such as “believe,” “may,” “estimate,”
“anticipate,” “continue,” “intend,” “expect,” “plan,” the negative of
these terms, or other similar expressions, and include the assumptions
that underlie such statements. Such statements include, but are not
limited to, statements regarding the Company’s SMRT technology. These
statements are subject to known and unknown risks and uncertainties that
could cause actual results to differ materially from those expressed or
implied by such statements, including but not limited to risks discussed
from time to time in documents
has filed with the
risks identified under the section captioned “Risk Factors” in its
recently filed Quarterly Report on Form 10-Q. All forward-looking
statements are based on estimates, projections and assumptions as of the
date hereof. Pacific Biosciences undertakes no obligation to update any
forward-looking statements.
Media:
For Pacific Biosciences
Litchfield, 415-793-6468
nicole@bioscribe.com
or
Investors:
Pacific
Biosciences
ir@pacificbiosciences.com
Source:
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