July 7, 2019  |  

Short genome report of cellulose-producing commensal Escherichia coli 1094.

Authors: Bernal-Bayard, Joaquin and Gomez-Valero, Laura and Wessel, Aimee and Khanna, Varun and Bouchier, Christiane and Ghigo, Jean-Marc

Bacterial surface colonization and biofilm formation often rely on the production of an extracellular polymeric matrix that mediates cell-cell and cell-surface contacts. In Escherichia coli and many Betaproteobacteria and Gammaproteobacteria cellulose is often the main component of the extracellular matrix. Here we report the complete genome sequence of the cellulose producing strain E. coli 1094 and compare it with five other closely related genomes within E. coli phylogenetic group A. We present a comparative analysis of the regions encoding genes responsible for cellulose biosynthesis and discuss the changes that could have led to the loss of this important adaptive advantage in several E. coli strains. Data deposition: The annotated genome sequence has been deposited at the European Nucleotide Archive under the accession number PRJEB21000.

Journal: Standards in genomic sciences
DOI: 10.1186/s40793-018-0316-0
Year: 2018

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