July 7, 2019  |  

Draft genome sequence of the extremely halophilic archaeon Haladaptatus cibarius type strain D43T isolated from fermented seafood

Authors: Lee, Hae-Won and Kim, Dae-Won and Lee, Mi-Hwa and Kim, Byung-Yong and Cho, Yong-Joon and Yim, Kyung June and Song, Hye Seon and Rhee, Jin-Kyu and Seo, Myung-Ji and Choi, Hak-Jong andChoi, Jong-Soon and Lee, Dong-Gi and Yoon, Changmann and Nam, Young-Do and Roh, Seong-Woon

An extremely halophilic archaeon, Haladaptatus cibarius D43 T , was isolated from traditional Korean salt-rich fermented seafood. Strain D43 T shows the highest 16S rRNA gene sequence similarity (98.7 %) with Haladaptatus litoreus RO1-28 T , is Gram-negative staining, motile, and extremely halophilic. Despite potential industrial applications of extremely halophilic archaea, their genome characteristics remain obscure. Here, we describe the whole genome sequence and annotated features of strain D43 T . The 3,926,724 bp genome includes 4,092 protein-coding and 57 RNA genes (including 6 rRNA and 49 tRNA genes) with an average G?+?C content of 57.76 %.

Journal: Standards in genomic sciences
DOI: 10.1186/s40793-015-0051-8
Year: 2015

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