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NCBI Accessioned Human Genome Assemblies using PacBio Sequencing Data
Comparative Assembly Statistics 		Last Updated: October 2019
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NCBI AccessionAssembly nameSequencing technology
Genome coverage
Assembly leveltotal-length
total-gap-length
scaffold-count
scaffold-N50contig-countcontig-N50Date
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GCA_003634875.1HG00733_Phased_DiploidPacBio Sequel; Illumina HiSeq HiC75xScaffold57864986631188005661525101741754262928782018-10-5
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GCA_003601015.1HG03807_prelim_1.0PacBio68.6xContig28619389290NANA310384206702018-9-27
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GCA_003574075.1HG02818_prelim_1.0PacBio86.84xContig28757703610NANA3267224994042018-9-18
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GCA_001297185.2
PacBioCHM1_r2_GenBank_08152018
PacBio; Illumina60xContig29957359150NANA3709265470482018-8-31
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GCA_002180035.2HG00514_prelim_3.0PacBio RSII80.0xChromosome30943300962293409972226893844952877293968772018-5-22
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GCA_003086635.1HG03486_prelim_1.0PacBio68.12xContig28681261310NANA346553015242018-5-2
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GCA_003070785.1HG02059_prelim_1.0PacBio78.35xContig28982750030NANA3180252931512018-4-24
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GCA_002077035.3NA12878_prelim_3.0PacBio RSII75xChromosome30882108902369152692221890031013220168210282018-2-9
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GCA_002884485.1CHM13_HSA_v1PacBio; Illumina76.3xContig28759992480NANA1916292607142018-1-16
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GCA_002884475.1YRI_HSA_v1PacBio; Illumina123.0xContig28780635740NANA364266058842018-1-16
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GCA_002872155.1NA19434_prelim_1.0PacBio RSII73xContig28642620810NANA3123215133962018-1-10
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GCA_000001405.27GRCh38.p12multipleNAChromosome3257347282161368351875593644141536564130542017-12-21
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GCA_001524155.4NA19240_prelim_3.0PacBio73xChromosome30884952382217487661826894676832521291406312017-7-19
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GCA_002209525.2HG01352_prelim_2.1PacBio RSII74.6xContig28845268100NANA3162216449772018-7-2
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GCA_002208065.1HG00733_prelim_1.0PacBio RSII80xContig28820018800NANA3580221625692017-6-26
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GCA_001879175.2AK1_MHC_Haplotigs_v1PacBio50.0xContig59006440NANA810907272016-11-15
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GCA_002009925.1AK1_Haplotigs_v1PacBio50.0xContig48153412040NANA189698816672016-10-21
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GCA_001708065.2HX1_1.1PacBio; BioNano103.0xScaffold293408256839341374NANA923983250122016-10-21
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GCA_001750385.2AK1_v2PacBio101.0xScaffold2904207228373394792832448466233096180802622016-10-13
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GCA_001856745.1ASM185674v1PacBio102.0xContig29085681230NANA445685836942016-10-11
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GCA_001712695.1KOREF1.0Illumina HiSeq; PacBio154.7xChromosome2944055311318560466820425272253191986478652016-9-20
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GCA_001549605.1
GIAB Ashkenazim Father HG003/NA24149/hu6E4515 PacBio Assembly with PBcR
PacBio30.0xScaffold30317841350NANA226509160482016-2-16
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GCA_001549595.1
GIAB Ashkenazim Mother HG004/NA24143/hu8E87A9 PacBio Assembly with PBcR
PacBio30.0xScaffold29446908140NANA1577710397192016-2-16
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GCA_001542345.1
GIAB Ashkenazim Son HG002/NA24385/huAA53E0 PacBio Assembly with PBcR
PacBio70.0xContig29879705360NANA1230245251622016-1-28
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GCA_001015385.3
CHM13 CA Sensitive 2.5% Error
PacBio70.0xScaffold30650031630NANA12091122524462015-11-20
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GCA_000983455.2CHM13 Draft AssemblyPacBio52.0xContig29411356180NANA4961105495912015-11-20
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GCA_001292825.2HS1011_v1.1
Illumina; PacBio (RS and RSII)
165.0xChromosome287229547665281374655374315606314833730392015-11-12
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GCA_001420745.1
CA P5+P6 CHM1 Assembly Sensitive 2.5% Error
PacBio120.0xScaffold31065630340NANA7485113346452015-11-2
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GCA_001421375.1
CA P5+P6 CHM1 Assembly Sensitive 5% Error
PacBio120.0xScaffold30851898200NANA7253178435442015-11-2
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GCA_001420765.1
CA P5+P6 CHM1 Assembly Sensitive No Breaking 2.5% Error
PacBio120.0xContig29894272640NANA3188340077012015-11-2
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GCA_001420755.1
CA P5+P6 CHM1 Assembly Sensitive No Breaking 5% Error
PacBio120.0xContig29492851870NANA2416309351242015-11-2
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GCA_001307015.1
CA P5+P6 CHM1 Assembly Conservative 2.5% Error
PacBio115.0xScaffold30064605150NANA5307261627262015-10-14
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GCA_001307125.1
CA P5+P6 CHM1 Assembly Default 5% Error
PacBio115.0xScaffold30536453040NANA7250233131042015-10-14
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GCA_001307025.1
CA P6 CHM1 Conservative 2.5%
PacBio61.0xContig29396307030NANA4850206093042015-10-14
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GCA_001297185.1
PacBioCHM1_r2_GenBank_08312015
PacBio61.0xContig29964262930NANA3641268998412015-9-22
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GCA_001015355.1
CHM13 CA Sensitive 5% Error
PacBio70.0xScaffold30289178710NANA11138193577012015-6-1
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GCA_001013985.1ASM101398v1
PacBio; Bionano Genomics
44.0xScaffold317657437914635228618903268340812123515577162015-5-29
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GCA_001007805.1
PacBioCHM1_r1_02092014
PacBio54.0xScaffold32390812990NANA2631244986082015-5-15
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GCA_000983475.1
CHM13 CA Conservative 2.5% Error
PacBio70.0xScaffold29964169350NANA1043055503362015-4-30
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GCA_000983465.1CHM13 Default 5% ErrorPacBio70.0xScaffold30612407320NANA15538133315282015-4-30
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GCA_000772585.3ASM77258v3PacBio54.0xContig32595183990NANA4091639454912015-1-21
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GCA_000786075.2hs38d1multipleNAScaffold5792522023852785238527852014-12-18
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GCA_008583285.1HG02106_prelim_1.0PacBio73.9XContig2,887,220,3600NANA26363,228,8262019-9-19
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GCA_008065235.1HG00268_prelim_1.0PacBio95.8XContig2,908,574,0820NANA199520,033,7862019-8-22
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GCA_007821485.1HG04217_prelim_1.0PacBio71.8XContig2,878,155,4290NANA42493,421,9952019-8-1
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GCA_004796485.1
HG002_CCS_canu_maternal_1.0
PacBio HiFi28XContig2,111,680,1120NANA408917,040,8112019-4-16
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GCA_004796285.1
HG002_CCS_canu_paternal_1.0
PacBio HiFi28XContig2,957,656,0650NANA681816,145,2982019-4-16
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